Supplementary Tables

  • Supplemetary Table 1: The 500+ expression experiments that we have used as input to the GRAM algorithm.

  • Supplemetary Table 2: Activator regulatory relationships identified by analysis of modules.

  • Supplemetary Table 3: Modules identified by the GRAM algorithm using 500+ expression data sets and rich media binding data.

  • Supplemetary Table 4: Previous evidence for regulator-regulator interactions that were predicted by our modules.

  • Supplemetary Table 5: Validating GRAM's binding predictions for STB1.

  • Supplemetary Table 6: Validating GRAM's predictions using motif data.

  • Supplemetary Table 7: Transcription factors selected for the rapamycin binding experiments.

  • Supplemetary Table 8: Rapamycin modules identified by GRAM.